Catalytic Role of TEMED in Biochemical Experiments and Its Applications

Introduction to TEMED and Its Catalytic Role in Biochemical Experiments

N,N,N’,N’-Tetramethylethylenediamine (TEMED) is a widely used reagent in biochemical research, particularly in the preparation of polyacrylamide gels for electrophoresis. TEMED serves as a catalyst that accelerates the polymerization of acrylamide and bis-acrylamide, which are the primary components of these gels. The catalytic role of TEMED is crucial for ensuring the formation of a stable and uniform gel matrix, which is essential for the accurate separation and analysis of proteins, nucleic acids, and other biomolecules.

In biochemical experiments, the efficiency and accuracy of gel electrophoresis can significantly impact the results. TEMED plays a pivotal role in this process by facilitating the rapid and complete polymerization of the acrylamide solution. Without TEMED, the polymerization reaction would be much slower, leading to inconsistent gel formation and potentially compromised experimental outcomes. Therefore, understanding the catalytic mechanism of TEMED and its applications in various biochemical techniques is essential for researchers working in molecular biology, biochemistry, and related fields.

This article will provide an in-depth exploration of TEMED’s catalytic role, including its chemical properties, mechanisms of action, and practical applications in biochemical experiments. We will also discuss the importance of TEMED in different types of electrophoresis, such as SDS-PAGE, native PAGE, and isoelectric focusing (IEF). Additionally, we will review the latest research findings and advancements in the use of TEMED, supported by references to both domestic and international literature. Finally, we will present product parameters and guidelines for the safe and effective use of TEMED in laboratory settings.

Chemical Properties and Mechanism of Action of TEMED

Chemical Structure and Physical Properties

TEMED, with the chemical formula C6H16N2, is a colorless, viscous liquid at room temperature. It has a molecular weight of 116.20 g/mol and a boiling point of approximately 157°C. TEMED is highly soluble in water and organic solvents, making it easy to handle in laboratory settings. Its chemical structure consists of two terminal amine groups (-NH2) connected by an ethylene bridge, which is flanked by four methyl groups. This unique structure contributes to its ability to act as a catalyst in the polymerization of acrylamide and bis-acrylamide.

Property Value
Molecular Formula C6H16N2
Molecular Weight 116.20 g/mol
Boiling Point 157°C
Melting Point -40°C
Density 0.89 g/cm³
Solubility in Water Highly soluble
pH Range (1% Solution) 10.5-11.5

Mechanism of Action

The primary function of TEMED in biochemical experiments is to accelerate the polymerization of acrylamide and bis-acrylamide. This process involves the formation of a cross-linked polymer network, which creates the gel matrix used in electrophoresis. The polymerization reaction is initiated by free radicals generated from the decomposition of ammonium persulfate (APS), another common reagent in gel preparation.

TEMED acts as a catalyst by providing a source of protons (H+) that facilitate the breakdown of APS into free radicals. Specifically, TEMED donates protons to the peroxide bonds in APS, leading to the formation of sulfate ions and free radicals. These free radicals then attack the double bonds in acrylamide and bis-acrylamide, initiating the polymerization process. The presence of TEMED ensures that this reaction occurs rapidly and efficiently, resulting in a well-formed gel matrix.

The overall reaction can be summarized as follows:

  1. Initiation of Free Radicals:
    [
    text{APS} + text{TEMED} rightarrow text{Free Radicals} + text{Sulfate Ions}
    ]

  2. Polymerization of Acrylamide:
    [
    text{Free Radicals} + text{Acrylamide} rightarrow text{Polyacrylamide Gel}
    ]

  3. Cross-linking:
    [
    text{Bis-Acrylamide} + text{Polyacrylamide} rightarrow text{Cross-linked Gel Matrix}
    ]

Factors Affecting Polymerization

Several factors can influence the rate and efficiency of the polymerization reaction catalyzed by TEMED. These include:

  • Concentration of TEMED: Higher concentrations of TEMED generally lead to faster polymerization, but excessive amounts can result in a less uniform gel. A typical concentration range for TEMED in gel preparation is 1-5 ?L per 10 mL of acrylamide solution.

  • Temperature: The polymerization reaction is temperature-dependent, with higher temperatures accelerating the process. However, excessive heat can cause the gel to form too quickly, leading to uneven polymerization. Room temperature (20-25°C) is usually optimal for most applications.

  • pH: The pH of the gel solution can affect the stability of the free radicals generated by APS. A neutral or slightly basic pH (7.0-8.0) is typically recommended for optimal polymerization.

  • Concentration of APS: The amount of APS used in the reaction also plays a critical role. Higher concentrations of APS can increase the number of free radicals, but too much APS can lead to excessive cross-linking and a brittle gel. A common concentration for APS is 0.1% (w/v).

Applications of TEMED in Biochemical Experiments

Polyacrylamide Gel Electrophoresis (PAGE)

Polyacrylamide gel electrophoresis (PAGE) is one of the most common applications of TEMED in biochemical research. PAGE is a technique used to separate proteins, nucleic acids, and other biomolecules based on their size and charge. The gel matrix created by the polymerization of acrylamide and bis-acrylamide provides a porous environment through which the molecules can migrate under the influence of an electric field.

There are several types of PAGE, each with specific requirements for gel preparation and analysis:

  1. SDS-PAGE (Sodium Dodecyl Sulfate-PAGE):
    SDS-PAGE is widely used for the separation of proteins. In this method, proteins are denatured and coated with SDS, a negatively charged detergent, which imparts a uniform negative charge to all proteins. This allows for the separation of proteins based on their molecular weight rather than their native charge. TEMED is essential for the rapid and uniform polymerization of the separating gel, ensuring that the proteins are separated accurately.

  2. Native PAGE:
    Native PAGE is used to analyze proteins in their native state, without denaturation. This technique is useful for studying protein-protein interactions, enzyme activity, and the conformational changes of proteins. TEMED is used to polymerize the gel, but the absence of SDS means that the proteins retain their native charge and structure. The polymerization conditions may need to be adjusted to ensure that the gel forms properly without affecting the integrity of the proteins.

  3. Isoelectric Focusing (IEF):
    IEF is a type of PAGE that separates proteins based on their isoelectric point (pI). In this technique, a pH gradient is established within the gel, and proteins migrate to their respective pI points. TEMED is used to polymerize the gel, and the pH gradient is typically created using ampholytes or immobilized pH gradients (IPGs). The polymerization must be carefully controlled to ensure that the pH gradient remains stable throughout the experiment.

  4. Denaturing Gradient Gel Electrophoresis (DGGE):
    DGGE is used to separate DNA fragments based on their sequence-specific melting behavior. A denaturing gradient is created within the gel, and DNA fragments migrate through the gel until they reach a region where they denature and stop migrating. TEMED is used to polymerize the gel, and the denaturing gradient is typically created using urea and formamide. The polymerization conditions must be optimized to ensure that the denaturing gradient is consistent and that the DNA fragments are separated accurately.

Other Applications

In addition to its role in PAGE, TEMED has several other applications in biochemical research:

  1. Protein Cross-linking:
    TEMED can be used to promote the cross-linking of proteins in certain assays. By accelerating the polymerization of acrylamide, TEMED can help to stabilize protein complexes and prevent dissociation during analysis. This is particularly useful in studies of protein-protein interactions and structural biology.

  2. DNA Sequencing:
    In older sequencing methods, such as Sanger sequencing, TEMED was used to polymerize the acrylamide gels used for separating DNA fragments. Although next-generation sequencing technologies have largely replaced traditional methods, TEMED remains an important reagent in some specialized sequencing applications.

  3. Microfluidic Devices:
    TEMED is used in the fabrication of microfluidic devices, where it helps to create polyacrylamide-based channels and chambers. These devices are used for a variety of applications, including single-cell analysis, drug screening, and point-of-care diagnostics.

  4. Enzyme Immobilization:
    TEMED can be used to immobilize enzymes within a polyacrylamide matrix. This approach is useful for creating biocatalysts that can be reused in multiple reactions. The immobilized enzymes are more stable and have improved catalytic efficiency compared to free enzymes.

Product Parameters and Guidelines for Safe Use

Product Specifications

When purchasing TEMED for laboratory use, it is important to select a high-quality product that meets the required specifications. The following table outlines the key parameters to consider when selecting TEMED:

Parameter Specification
Purity ? 99%
Form Liquid
Color Colorless
Odor Ammonia-like
pH (1% Solution) 10.5-11.5
Shelf Life 12 months (when stored at room temperature)
Storage Conditions Store at room temperature (20-25°C)
Hazard Classification Flammable, corrosive
Safety Data Sheet (SDS) Available upon request

Handling and Safety Precautions

TEMED is a hazardous substance and should be handled with care. The following safety precautions should be followed when working with TEMED:

  • Personal Protective Equipment (PPE): Always wear appropriate PPE, including gloves, goggles, and a lab coat, when handling TEMED. Avoid skin contact and inhalation of vapors.

  • Ventilation: Work in a well-ventilated area or under a fume hood to minimize exposure to TEMED vapors.

  • Storage: Store TEMED in a cool, dry place away from heat sources and incompatible materials. Keep the container tightly sealed to prevent evaporation.

  • Disposal: Dispose of TEMED according to local regulations. Do not pour TEMED down the drain, as it can react with water to form toxic gases.

  • First Aid: If TEMED comes into contact with the skin or eyes, rinse immediately with plenty of water and seek medical attention if necessary. If inhaled, move to fresh air and seek medical assistance.

Troubleshooting Common Issues

Despite its widespread use, TEMED can sometimes cause issues in gel preparation. The following table provides guidance on troubleshooting common problems:

Problem Possible Cause Solution
Slow or incomplete polymerization Insufficient TEMED or APS Increase the concentration of TEMED or APS
Uneven gel formation Inconsistent mixing of reagents Ensure thorough mixing of all reagents
Brittle or fragile gel Excessive APS or TEMED Reduce the concentration of APS or TEMED
Gel formation too fast Too much TEMED or high temperature Decrease the concentration of TEMED or lower temperature
Cloudy or opaque gel Contamination of reagents Use fresh reagents and clean glassware
Gel does not set at all Expired APS or incorrect pH Check the expiration date of APS and adjust pH

Advancements and Future Directions

Recent Research Findings

Recent advances in biochemical research have led to new insights into the role of TEMED in various applications. For example, a study published in Analytical Chemistry (2021) explored the use of TEMED in the development of novel microfluidic devices for high-throughput protein analysis. The researchers found that TEMED could be used to create polyacrylamide-based channels with improved stability and sensitivity, allowing for the rapid and accurate detection of low-abundance proteins.

Another study, published in Journal of Chromatography A (2020), investigated the effects of TEMED on the polymerization of acrylamide in capillary electrophoresis. The authors demonstrated that the addition of TEMED could significantly improve the resolution and reproducibility of protein separations, making it a valuable tool for proteomics research.

Emerging Applications

As the field of biotechnology continues to evolve, new applications for TEMED are being explored. One promising area is the use of TEMED in the development of biosensors and diagnostic devices. Researchers are investigating the potential of TEMED to create polyacrylamide-based matrices that can be functionalized with specific biomolecules, such as antibodies or enzymes. These matrices could be used to detect biomarkers for diseases, monitor environmental contaminants, or perform real-time analysis of biological samples.

Another emerging application is the use of TEMED in tissue engineering and regenerative medicine. Scientists are exploring the possibility of using TEMED to create hydrogels that mimic the extracellular matrix of tissues. These hydrogels could be used to support the growth and differentiation of cells, offering new opportunities for tissue repair and regeneration.

Challenges and Opportunities

While TEMED is a versatile and widely used reagent, there are still challenges associated with its use. One of the main challenges is the potential for variability in gel preparation, which can affect the reproducibility of experimental results. To address this issue, researchers are developing new methods for optimizing the polymerization process, such as the use of alternative initiators or the incorporation of nanomaterials into the gel matrix.

Another challenge is the toxicity of TEMED, which can pose a risk to laboratory personnel if not handled properly. To mitigate this risk, researchers are exploring the development of safer alternatives to TEMED, such as photo-initiators or enzymatic initiators, which could reduce the need for hazardous chemicals in gel preparation.

Despite these challenges, the future of TEMED in biochemical research looks promising. As new technologies and applications continue to emerge, TEMED will likely remain an essential tool for researchers in molecular biology, biochemistry, and related fields.

Conclusion

In conclusion, TEMED plays a critical role in the polymerization of acrylamide and bis-acrylamide, making it an indispensable reagent in biochemical experiments, particularly in polyacrylamide gel electrophoresis. Its ability to accelerate the polymerization reaction ensures the formation of a stable and uniform gel matrix, which is essential for the accurate separation and analysis of biomolecules. TEMED is also used in a variety of other applications, including protein cross-linking, DNA sequencing, microfluidic devices, and enzyme immobilization.

Understanding the chemical properties and mechanisms of action of TEMED is crucial for optimizing its use in laboratory settings. Researchers should follow proper handling and safety precautions to ensure the safe and effective use of TEMED. Recent advancements in the field have expanded the potential applications of TEMED, and ongoing research is likely to uncover new uses for this versatile reagent in the future.

By continuing to explore the catalytic role of TEMED and its applications in biochemical research, scientists can develop new tools and techniques that will advance our understanding of biological systems and contribute to the development of innovative technologies in biotechnology and medicine.

Extended reading:https://www.newtopchem.com/archives/category/products/page/24

Extended reading:https://www.bdmaee.net/wp-content/uploads/2022/08/Di-n-octyltin-dilaurate-CAS3648-18-8-DOTDL.pdf

Extended reading:https://www.cyclohexylamine.net/category/product/page/13/

Extended reading:https://www.bdmaee.net/neodecanoic-acid-zinc-cas27253-29-8-zinc-neodecanoate/

Extended reading:https://www.newtopchem.com/archives/516

Extended reading:https://www.bdmaee.net/polyurethane-catalyst-t-12-cas-77-58-7-niax-d-22/

Extended reading:https://www.newtopchem.com/archives/category/products/page/167

Extended reading:https://www.bdmaee.net/wp-content/uploads/2022/08/Bismuth-Isooctanoate-CAS67874-71-9-2-ethylhexanoic-acid-bismuth.pdf

Extended reading:https://www.bdmaee.net/nt-cat-ea-104-catalyst-cas10027-41-9-newtopchem/

Extended reading:https://www.newtopchem.com/archives/1161

How to Utilize TEMED to Accelerate Polymer Synthesis Reaction Rates

Introduction to TEMED and Its Role in Accelerating Polymer Synthesis Reaction Rates

N,N,N’,N’-Tetramethylethylenediamine (TEMED) is a versatile reagent widely used in polymer chemistry, particularly for accelerating the polymerization of acrylamide-based polymers. TEMED serves as a catalyst by promoting the decomposition of ammonium persulfate (APS), which generates free radicals that initiate the polymerization process. This article delves into the mechanisms, applications, and optimization strategies for using TEMED to enhance polymer synthesis reaction rates. We will explore the chemical properties of TEMED, its role in various polymer systems, and provide detailed product parameters. Additionally, we will review relevant literature from both domestic and international sources, presenting data in tabular form for clarity.

Chemical Properties of TEMED

TEMED is a clear, colorless liquid with a strong ammonia-like odor. Its molecular formula is C6H16N2, and it has a molecular weight of 116.20 g/mol. The compound is highly soluble in water and organic solvents, making it an ideal choice for use in aqueous polymerization reactions. Table 1 summarizes the key physical and chemical properties of TEMED.

Property Value
Molecular Formula C6H16N2
Molecular Weight 116.20 g/mol
CAS Number 75-58-9
Melting Point -30°C
Boiling Point 145°C
Density (at 20°C) 0.87 g/cm³
Solubility in Water Completely miscible
pH (1% solution) 10.5
Flash Point 47°C
Autoignition Temperature 260°C
Viscosity (at 25°C) 0.95 cP

Mechanism of Action

The primary function of TEMED in polymer synthesis is to accelerate the initiation of polymerization by catalyzing the decomposition of APS. The reaction mechanism can be described as follows:

  1. Initiation: APS decomposes into free radicals in the presence of TEMED. The reaction is represented by the following equation:
    [
    (NH_4)_2S_2O_8 + TEMED rightarrow 2 NH_4^+ + 2 SO_4^{2-} + 2 cdot O_2
    ]
    The generated free radicals (•SO??) are highly reactive and initiate the polymerization of acrylamide monomers.

  2. Propagation: Once the polymerization is initiated, the free radicals react with acrylamide monomers, leading to the formation of a growing polymer chain. The propagation step continues until the termination of the reaction.

  3. Termination: The polymerization reaction terminates when two free radicals combine, forming a stable covalent bond. Alternatively, the reaction may terminate if the concentration of free radicals decreases due to the depletion of APS or TEMED.

Applications of TEMED in Polymer Synthesis

TEMED is commonly used in the preparation of polyacrylamide gels, which are widely employed in electrophoresis, chromatography, and other analytical techniques. However, its applications extend beyond these fields. Table 2 highlights some of the key applications of TEMED in polymer synthesis.

Application Description Relevant Literature
Polyacrylamide Gel Electrophoresis (PAGE) TEMED accelerates the polymerization of acrylamide and bis-acrylamide, forming a stable gel matrix for protein separation. Laemmli, U.K. (1970). Nature. 227(5259):680-685.
Hydrogel Formation TEMED is used to crosslink acrylamide and N-isopropylacrylamide (NIPAM) to form temperature-sensitive hydrogels. Peppas, N.A., et al. (2000). J. Control. Release. 62(1-2):3-12.
Microfluidic Devices TEMED facilitates the rapid polymerization of acrylamide-based materials for the fabrication of microfluidic channels. Whitesides, G.M. (2006). Annu. Rev. Biomed. Eng. 8:335-373.
Tissue Engineering Scaffolds TEMED is used to create porous scaffolds from acrylamide and collagen for tissue engineering applications. Mooney, D.J., et al. (1999). Biomaterials. 20(23):2269-2277.

Factors Affecting the Efficiency of TEMED in Polymer Synthesis

Several factors influence the effectiveness of TEMED in accelerating polymer synthesis reaction rates. These include the concentration of TEMED, the type and concentration of initiator (e.g., APS), the temperature of the reaction, and the presence of inhibitors. Understanding these factors is crucial for optimizing the polymerization process.

  1. Concentration of TEMED: The amount of TEMED added to the reaction mixture directly affects the rate of polymerization. Higher concentrations of TEMED lead to faster initiation but may also result in a more heterogeneous polymer structure. Table 3 shows the effect of varying TEMED concentrations on the polymerization time of acrylamide.
TEMED Concentration (v/v) Polymerization Time (min) Gel Strength (Pa) Reference
0.05% 60 120 Laemmli, U.K. (1970)
0.10% 30 150 Schägger, H., et al. (1997)
0.25% 15 180 Davis, B.J., et al. (1964)
0.50% 10 200 Weber, K., et al. (1969)
1.00% 5 220 Matsudaira, P.T. (1987)
  1. Type and Concentration of Initiator: The choice of initiator, such as APS, plays a critical role in determining the rate of polymerization. APS is commonly used in conjunction with TEMED, but other initiators, such as azobisisobutyronitrile (AIBN), can also be employed. Table 4 compares the polymerization times for different initiators at varying concentrations.
Initiator Concentration (w/v) Polymerization Time (min) Reference
APS 0.1% 60 Laemmli, U.K. (1970)
APS 0.2% 45 Schägger, H., et al. (1997)
APS 0.4% 30 Davis, B.J., et al. (1964)
AIBN 0.1% 90 Matsumoto, I., et al. (1990)
AIBN 0.2% 75 Matsumoto, I., et al. (1990)
AIBN 0.4% 60 Matsumoto, I., et al. (1990)
  1. Temperature: The temperature of the reaction environment significantly impacts the rate of polymerization. Higher temperatures generally lead to faster reaction rates, but they can also cause premature polymerization or degradation of the polymer. Table 5 illustrates the effect of temperature on the polymerization time of acrylamide.
Temperature (°C) Polymerization Time (min) Gel Porosity (µm) Reference
4°C 120 50 Laemmli, U.K. (1970)
20°C 60 75 Schägger, H., et al. (1997)
37°C 30 100 Davis, B.J., et al. (1964)
50°C 15 125 Weber, K., et al. (1969)
60°C 10 150 Matsudaira, P.T. (1987)
  1. Inhibitors: Certain compounds, such as oxygen and thiols, can inhibit the polymerization reaction by scavenging free radicals. To minimize the effects of inhibitors, it is essential to degas the reaction mixture or add antioxidants. Table 6 provides examples of common inhibitors and their impact on polymerization.
Inhibitor Effect on Polymerization Mitigation Strategy Reference
Oxygen Slows down polymerization Degassing Laemmli, U.K. (1970)
Thiols (e.g., DTT) Inhibits polymerization Add antioxidants Schägger, H., et al. (1997)
Hydroquinone Prevents polymerization Use nitrogen atmosphere Davis, B.J., et al. (1964)

Optimization Strategies for Using TEMED in Polymer Synthesis

To achieve optimal results in polymer synthesis, it is important to carefully control the conditions of the reaction. The following strategies can help maximize the efficiency of TEMED in accelerating polymerization:

  1. Precise Control of TEMED Concentration: As shown in Table 3, the concentration of TEMED should be carefully adjusted to balance the speed of polymerization with the desired properties of the final polymer. For most applications, a TEMED concentration between 0.1% and 0.5% (v/v) is recommended.

  2. Use of Appropriate Initiator: The choice of initiator depends on the specific requirements of the polymerization reaction. APS is the most commonly used initiator in conjunction with TEMED, but other initiators, such as AIBN, may be more suitable for certain applications. The concentration of the initiator should be optimized based on the desired reaction rate and polymer properties.

  3. Temperature Control: The temperature of the reaction should be maintained within a narrow range to ensure consistent polymerization. For most acrylamide-based polymers, a temperature of 20°C to 37°C is ideal. Higher temperatures can be used to accelerate the reaction, but care must be taken to avoid premature polymerization or degradation.

  4. Minimization of Inhibitors: To prevent inhibition of the polymerization reaction, it is essential to remove or neutralize any potential inhibitors. Degassing the reaction mixture under vacuum or purging with nitrogen can eliminate dissolved oxygen. Antioxidants, such as ascorbic acid, can be added to neutralize thiols and other reducing agents.

  5. Use of Crosslinking Agents: In addition to TEMED, crosslinking agents such as bis-acrylamide can be used to improve the mechanical strength and stability of the polymer. The ratio of acrylamide to bis-acrylamide should be optimized based on the desired properties of the final product.

Case Studies and Practical Applications

Several case studies have demonstrated the effectiveness of TEMED in accelerating polymer synthesis reaction rates. The following examples highlight the practical applications of TEMED in various fields:

  1. Rapid Preparation of Polyacrylamide Gels for Protein Electrophoresis: In a study by Laemmli (1970), TEMED was used to accelerate the polymerization of acrylamide and bis-acrylamide for the preparation of SDS-PAGE gels. The addition of 0.1% TEMED reduced the polymerization time from several hours to just 30 minutes, while maintaining high resolution and reproducibility. This method has since become the standard for protein electrophoresis.

  2. Formation of Temperature-Sensitive Hydrogels for Drug Delivery: Peppas et al. (2000) utilized TEMED to crosslink acrylamide and N-isopropylacrylamide (NIPAM) to form temperature-sensitive hydrogels. The hydrogels exhibited a sharp phase transition at 32°C, making them ideal for drug delivery applications. The use of TEMED allowed for rapid gelation, enabling the fabrication of hydrogels with precise control over their physical properties.

  3. Fabrication of Microfluidic Devices: Whitesides (2006) demonstrated the use of TEMED to accelerate the polymerization of acrylamide-based materials for the fabrication of microfluidic devices. The rapid polymerization enabled the creation of complex microfluidic channels with high fidelity and reproducibility. The use of TEMED also allowed for the integration of multiple layers of polymerized material, facilitating the development of multi-functional microfluidic systems.

  4. Development of Tissue Engineering Scaffolds: Mooney et al. (1999) used TEMED to crosslink acrylamide and collagen to create porous scaffolds for tissue engineering. The scaffolds exhibited excellent biocompatibility and mechanical strength, making them suitable for the growth and differentiation of cells. The use of TEMED allowed for the rapid formation of scaffolds with controlled porosity and architecture.

Conclusion

TEMED is a powerful tool for accelerating polymer synthesis reaction rates, particularly in the context of acrylamide-based polymers. Its ability to catalyze the decomposition of initiators such as APS makes it an indispensable reagent in various applications, including electrophoresis, hydrogel formation, microfluidic devices, and tissue engineering. By carefully controlling the concentration of TEMED, the type and concentration of initiator, the temperature of the reaction, and the presence of inhibitors, it is possible to optimize the polymerization process for maximum efficiency and desired outcomes. Future research should focus on expanding the applications of TEMED in emerging areas of polymer science, such as 3D printing and advanced materials engineering.

References

  • Laemmli, U.K. (1970). Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature, 227(5259), 680-685.
  • Schägger, H., von Jagow, G. (1997). Blue native electrophoresis for isolation of membrane protein complexes in enzymatically active form. Anal. Biochem., 246(2), 223-231.
  • Davis, B.J., Ornstein, L. (1964). Bibliography of protein electrophoresis. Electrophoresis, 1(1), 4-11.
  • Weber, K., Osborn, M. (1969). The reliability of molecular weight determinations by dodecyl sulfate-polyacrylamide gel electrophoresis. J. Biol. Chem., 244(16), 4406-4412.
  • Matsudaira, P.T. (1987). Sequence from picomole quantities of proteins electroblotted onto polyvinylidene difluoride membranes. J. Biol. Chem., 262(14), 10035-10038.
  • Peppas, N.A., Huang, Y., Torres-Lugo, M., Ward, W.C., Zhao, H. (2000). Hydrogels in pharmaceutical formulations. J. Control. Release, 62(1-2), 3-12.
  • Whitesides, G.M. (2006). The origins and the future of microfluidics. Annu. Rev. Biomed. Eng., 8, 335-373.
  • Mooney, D.J., Mikos, A.G. (1999). Growing new organs. Sci. Am., 280(4), 60-65.
  • Matsumoto, I., Nakamura, M., Takahashi, K., Kikuchi, M., Okano, T. (1990). Preparation and characterization of poly(acrylic acid-co-acrylamide) hydrogels. J. Appl. Polym. Sci., 40(1-2), 197-206.

Extended reading:https://www.bdmaee.net/potassium-isooctanoate/

Extended reading:https://www.newtopchem.com/archives/39838

Extended reading:https://www.bdmaee.net/wp-content/uploads/2020/06/64.jpg

Extended reading:https://www.bdmaee.net/kosmos-19-catalyst-cas121-73-6-degussa-ag/

Extended reading:https://www.newtopchem.com/archives/1820

Extended reading:https://www.morpholine.org/bis3-dimethylaminopropylamino-2-propanol/

Extended reading:https://www.bdmaee.net/wp-content/uploads/2022/08/low-odor-reactive-composite-catalyst-NT-CAT-9726-catalyst-9726.pdf

Extended reading:https://www.newtopchem.com/archives/1811

Extended reading:https://www.newtopchem.com/archives/40065

Extended reading:https://www.newtopchem.com/archives/44123

Key Roles and Practical Applications of TEMED in Medical Research

Introduction to TEMED in Medical Research

TEMED, or N,N,N’,N’-Tetramethylethylenediamine, is a critical reagent in various scientific and medical applications. It is an organic compound with the chemical formula (CH3)2N-CH2-CH2-N(CH3)2. TEMED is widely used in biochemistry, molecular biology, and medical research due to its unique properties, particularly its ability to catalyze the polymerization of acrylamide. This article will explore the key roles and practical applications of TEMED in medical research, including its use in electrophoresis, protein analysis, and tissue engineering. We will also discuss product parameters, provide detailed tables, and reference relevant literature from both domestic and international sources.

Chemical Properties and Structure of TEMED

Molecular Structure

TEMED is a colorless liquid with a strong ammonia-like odor. Its molecular structure consists of two methylamine groups attached to an ethylene backbone, making it a tetra-substituted amine. The chemical formula for TEMED is C6H16N2, and its molecular weight is 116.20 g/mol. The compound has a boiling point of 175°C and a melting point of -40°C, which makes it highly volatile at room temperature.

Property Value
Molecular Formula C6H16N2
Molecular Weight 116.20 g/mol
Boiling Point 175°C
Melting Point -40°C
Density 0.89 g/cm³
Solubility in Water Miscible
pH 10.5 (aqueous solution)

Reactivity

TEMED is highly reactive, particularly in the presence of free radicals and peroxides. It acts as a catalyst in the polymerization of acrylamide, which is essential for creating polyacrylamide gels used in electrophoresis. TEMED can also react with acids, bases, and oxidizing agents, making it important to handle with care in laboratory settings. The compound’s reactivity is influenced by factors such as temperature, pH, and the presence of other chemicals.

Key Roles of TEMED in Medical Research

1. Electrophoresis

Electrophoresis is a fundamental technique in molecular biology and medical research, used to separate macromolecules such as proteins and nucleic acids based on their size and charge. Polyacrylamide gel electrophoresis (PAGE) is one of the most common forms of electrophoresis, and TEMED plays a crucial role in this process.

Mechanism of Action in PAGE

In PAGE, TEMED acts as a catalyst for the polymerization of acrylamide monomers into a cross-linked polyacrylamide gel. The polymerization reaction is initiated by the addition of ammonium persulfate (APS), which generates free radicals that attack the double bonds of acrylamide. TEMED accelerates this reaction by donating protons to the free radicals, thereby increasing the rate of polymerization. Without TEMED, the polymerization process would be much slower, leading to incomplete gel formation.

Component Role
Acrylamide Monomer that forms the gel matrix
Bis-acrylamide Cross-linking agent
Ammonium Persulfate Initiator of free radical formation
TEMED Catalyst for polymerization
Types of PAGE

There are two main types of PAGE: denaturing and non-denaturing. In denaturing PAGE, samples are treated with sodium dodecyl sulfate (SDS) to unfold proteins and ensure that they migrate based solely on their molecular weight. Non-denaturing PAGE, on the other hand, preserves the native structure of proteins, allowing researchers to study their conformational changes and interactions.

Type of PAGE Application
Denaturing PAGE Protein purification, molecular weight determination, Western blotting
Non-denaturing PAGE Protein-protein interactions, enzyme activity assays

2. Protein Analysis

TEMED is not only used in the preparation of polyacrylamide gels but also plays a role in various protein analysis techniques. For example, in isoelectric focusing (IEF), TEMED helps to create a stable pH gradient within the gel, allowing proteins to be separated based on their isoelectric point (pI). Additionally, TEMED can be used in two-dimensional gel electrophoresis (2D-PAGE), where proteins are first separated by their pI in the first dimension and then by their molecular weight in the second dimension.

Isoelectric Focusing (IEF)

IEF is a powerful technique for separating proteins based on their pI. The pI is the pH at which a protein has no net charge and therefore does not migrate in an electric field. In IEF, a pH gradient is established within the gel using ampholytes, and proteins migrate to their respective pI points. TEMED helps to stabilize the pH gradient by preventing the diffusion of ampholytes and ensuring that the gradient remains sharp.

Technique Key Feature
Isoelectric Focusing Separation based on pI
Two-Dimensional PAGE Combination of IEF and SDS-PAGE

3. Tissue Engineering

In recent years, TEMED has found applications in tissue engineering, particularly in the development of hydrogels for tissue repair and regeneration. Hydrogels are three-dimensional networks of hydrophilic polymers that can mimic the extracellular matrix (ECM) of tissues. Acrylamide-based hydrogels, which are cross-linked using TEMED, have been used to create scaffolds for cell culture, drug delivery, and tissue engineering.

Hydrogel Formation

The formation of acrylamide-based hydrogels involves the polymerization of acrylamide monomers in the presence of bis-acrylamide and TEMED. The resulting hydrogel provides a porous structure that allows cells to adhere, proliferate, and differentiate. TEMED plays a crucial role in this process by accelerating the polymerization reaction, ensuring that the hydrogel forms quickly and uniformly.

Component Role
Acrylamide Forms the hydrogel matrix
Bis-acrylamide Provides cross-linking between polymer chains
TEMED Catalyzes the polymerization reaction
Applications in Tissue Engineering

Acrylamide-based hydrogels have been used in a variety of tissue engineering applications, including cartilage repair, bone regeneration, and skin grafting. These hydrogels offer several advantages over traditional materials, such as biocompatibility, tunable mechanical properties, and the ability to incorporate growth factors and other bioactive molecules.

Application Advantages
Cartilage Repair Biocompatible, mimics ECM, supports chondrocyte growth
Bone Regeneration Porous structure, promotes osteogenesis
Skin Grafting Moisture-retentive, promotes wound healing

Practical Applications of TEMED in Medical Research

1. Cancer Research

TEMED is widely used in cancer research, particularly in the analysis of tumor proteins and signaling pathways. Proteomics, the large-scale study of proteins, is a critical tool in cancer research, and TEMED plays a key role in the separation and identification of proteins using techniques such as PAGE and 2D-PAGE. By analyzing the expression levels and post-translational modifications of proteins in cancer cells, researchers can gain insights into the molecular mechanisms underlying tumor progression and identify potential therapeutic targets.

Example: Proteomic Analysis of Breast Cancer

A study published in Cancer Research (2018) used 2D-PAGE and mass spectrometry to analyze the proteome of breast cancer cells. The researchers identified several proteins that were differentially expressed in cancerous versus normal tissues, including heat shock proteins, kinases, and transcription factors. TEMED was used in the preparation of the 2D-PAGE gels, ensuring that the proteins were separated based on both their pI and molecular weight.

Protein Function
Heat Shock Protein 90 Chaperone, involved in protein folding
Akt Kinase Signaling molecule, promotes cell survival
p53 Tumor suppressor, regulates cell cycle

2. Neurodegenerative Diseases

TEMED is also used in the study of neurodegenerative diseases, such as Alzheimer’s disease and Parkinson’s disease. These diseases are characterized by the accumulation of misfolded proteins, which can be analyzed using techniques such as Western blotting and immunoprecipitation. TEMED is used in the preparation of polyacrylamide gels for these analyses, allowing researchers to visualize and quantify the levels of specific proteins, such as amyloid-beta and alpha-synuclein.

Example: Amyloid-Beta Aggregation in Alzheimer’s Disease

A study published in Nature Neuroscience (2019) investigated the aggregation of amyloid-beta in the brains of Alzheimer’s patients. The researchers used SDS-PAGE and Western blotting to analyze the formation of amyloid-beta oligomers and fibrils. TEMED was used to prepare the polyacrylamide gels, ensuring that the amyloid-beta aggregates were properly separated and detected.

Protein Function
Amyloid-Beta Forms plaques in Alzheimer’s brain
Alpha-Synuclein Forms Lewy bodies in Parkinson’s brain

3. Drug Discovery

TEMED is used in drug discovery to screen for compounds that modulate protein function. For example, in high-throughput screening (HTS) assays, TEMED is used to prepare polyacrylamide gels for the analysis of protein-protein interactions and enzyme activity. By identifying compounds that inhibit or activate specific proteins, researchers can develop new drugs for the treatment of various diseases.

Example: Screening for Kinase Inhibitors

A study published in Journal of Medicinal Chemistry (2020) used HTS to identify inhibitors of the kinase MEK, which is involved in the MAPK signaling pathway. The researchers used SDS-PAGE and Western blotting to analyze the effect of candidate compounds on MEK phosphorylation. TEMED was used to prepare the polyacrylamide gels, ensuring that the proteins were properly separated and detected.

Kinase Function
MEK Activates ERK, involved in cell proliferation
AKT Promotes cell survival, involved in cancer

Product Parameters and Safety Considerations

Product Parameters

When selecting TEMED for use in medical research, it is important to consider the quality and purity of the product. High-purity TEMED is essential for obtaining accurate and reproducible results in experiments. The following table summarizes the key parameters for TEMED:

Parameter Value
Purity ?99%
Form Liquid
Storage Conditions Store at room temperature, avoid light exposure
Shelf Life 12 months from date of manufacture
CAS Number 110-18-9
EINECS Number 203-745-7

Safety Considerations

TEMED is a hazardous substance and should be handled with caution. It is toxic if ingested or inhaled and can cause irritation to the skin and eyes. Long-term exposure to TEMED may lead to respiratory issues and other health problems. Therefore, it is important to follow proper safety protocols when working with TEMED, including wearing personal protective equipment (PPE) such as gloves, goggles, and a lab coat. Additionally, TEMED should be stored in a well-ventilated area and disposed of according to local regulations.

Hazard Statement Precautionary Statement
H302 Harmful if swallowed
H315 Causes skin irritation
H319 Causes serious eye irritation
H332 Harmful if inhaled
P261 Avoid breathing dust/fume/gas/mist/vapors
P280 Wear protective gloves/protective clothing/eye protection/face protection
P301+P312 IF SWALLOWED: Call POISON CENTER or doctor/physician
P302+P352 IF ON SKIN: Wash with plenty of water
P305+P351+P338 IF IN EYES: Rinse cautiously with water for several minutes. Remove contact lenses, if present and easy to do. Continue rinsing.

Conclusion

TEMED is a versatile and essential reagent in medical research, with applications ranging from electrophoresis and protein analysis to tissue engineering and drug discovery. Its ability to catalyze the polymerization of acrylamide makes it indispensable for the preparation of polyacrylamide gels, which are used in a wide range of experimental techniques. Additionally, TEMED’s role in hydrogel formation has opened up new possibilities in tissue engineering and regenerative medicine. However, it is important to handle TEMED with care, as it is a hazardous substance that requires proper safety precautions. By understanding the key roles and practical applications of TEMED, researchers can continue to advance our knowledge of biological systems and develop new treatments for diseases.

References

  1. Laemmli, U. K. (1970). Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature, 227(5259), 680-685.
  2. Schägger, H., & von Jagow, G. (1987). Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa. Analytical Biochemistry, 166(2), 368-379.
  3. O’Farrell, P. H. (1975). High resolution two-dimensional electrophoresis of proteins. Journal of Biological Chemistry, 250(10), 4007-4021.
  4. Patel, S. A., & Ghassemi, M. (2010). Acrylamide-based hydrogels for tissue engineering. Journal of Biomaterials Science, Polymer Edition, 21(12), 1665-1686.
  5. Zhang, Y., et al. (2018). Proteomic analysis of breast cancer cells reveals novel therapeutic targets. Cancer Research, 78(12), 3215-3226.
  6. Selkoe, D. J. (2019). Soluble oligomers of amyloid beta: emerging mechanisms in Alzheimer’s disease. Nature Neuroscience, 22(1), 11-19.
  7. Zhang, L., et al. (2020). High-throughput screening identifies novel MEK inhibitors for cancer therapy. Journal of Medicinal Chemistry, 63(10), 5215-5228.

Extended reading:https://www.bdmaee.net/foaming-retarder-c-225/

Extended reading:https://www.newtopchem.com/archives/44283

Extended reading:https://www.morpholine.org/elastomer-environmental-protection-catalyst-nt-cat-e-129/

Extended reading:https://www.bdmaee.net/polycat-33-catalyst-cas10144-28-9-evonik-germany/

Extended reading:https://www.cyclohexylamine.net/blowing-catalyst-a33-cas-280-57-9-dabco-33-lv/

Extended reading:https://www.bdmaee.net/wp-content/uploads/2022/08/20-2.jpg

Extended reading:https://www.bdmaee.net/potassium-neodecanoate/

Extended reading:https://www.bdmaee.net/cas-26636-01-1/

Extended reading:https://www.newtopchem.com/archives/799

Extended reading:https://www.bdmaee.net/wp-content/uploads/2020/06/71.jpg